dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003252_386|CGC1
Gene ID: MGYG000003252_04161
Location and strand information: 759 - 2471 (-)
Family: GH93|GH0
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.0714
Protein molecular weight: 62891.97
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003252_386|CGC1
Gene ID: MGYG000003252_04162
Location and strand information: 2549 - 4423 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003252_386|CGC1
Gene ID: MGYG000003252_04163
Location and strand information: 4432 - 7506 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003252_386|CGC1
Gene ID: MGYG000003252_04164
Location and strand information: 7557 - 8549 (-)
Family: GH43_31|GH43
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.838
Protein molecular weight: 36922.47
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003252_386|CGC1
Gene ID: MGYG000003252_04165
Location and strand information: 8595 - 9953 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003252_386|CGC1
Gene ID: MGYG000003252_04166
Location and strand information: 10439 - 14419 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000003252_386|CGC1
Gene ID: MGYG000003252_04167
Location and strand information: 15054 - 16037 (-)
Family: GH43_31|GH43
Protein type: CAZyme
Protein description: Arabinoxylan arabinofuranohydrolase
Protein isoelectric point: 8.4869
Protein molecular weight: 37454.64
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003252_386|CGC1
Gene ID: MGYG000003252_04168
Location and strand information: 16059 - 18125 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003252_386|CGC1
Gene ID: MGYG000003252_04169
Location and strand information: 18352 - 19329 (-)
Family: GH43_3|GH43
Protein type: CAZyme
Protein description: Extracellular exo-alpha-(1->5)-L-arabinofuranosidase ArbA
Protein isoelectric point: 7.1451
Protein molecular weight: 36514.43
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003252_386|CGC1
Gene ID: MGYG000003252_04170
Location and strand information: 19465 - 20490 (-)
Family: GH159
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.2261
Protein molecular weight: 39073.07
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is human milk oligosaccharide download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003252_04161	hypothetical protein	CAZyme	759	2471	-	GH93\| GH0
MGYG000003252_04162	hypothetical protein	null	2549	4423	-	SusD-like_3\| SusD_RagB
MGYG000003252_04163	hypothetical protein	TC	4432	7506	-	1.B.14.6.1
MGYG000003252_04164	hypothetical protein	CAZyme	7557	8549	-	GH43_31\| GH43
MGYG000003252_04165	hypothetical protein	null	8595	9953	-	TIG\| SGL\| NHL
MGYG000003252_04166	Sensor histidine kinase RcsC	TF	10439	14419	-	HTH_AraC+HTH_AraC
MGYG000003252_04167	Arabinoxylan arabinofuranohydrolase	CAZyme	15054	16037	-	GH43_31\| GH43
MGYG000003252_04168	hypothetical protein	null	16059	18125	-	No domain
MGYG000003252_04169	Extracellular exo-alpha-(1->5)-L-arabinofuranosidase ArbA	CAZyme	18352	19329	-	GH43_3\| GH43
MGYG000003252_04170	hypothetical protein	CAZyme	19465	20490	-	GH159
Protein ID	Protein Name	Type	Start	End	Strand	Signature